PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923408.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 241aa    MW: 25868.6 Da    PI: 9.2676
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.00049186203521
                     TTT.EEESSHHHHHHHHH CS
         zf-C2H2   5 dCg.ksFsrksnLkrHir 21 
                      C+ + Fs+ snL rH+r
  XP_023923408.1 186 GCNgRQFSTFSNLLRHQR 203
                     8999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDHNYIPPMR VSQAPAPGNP SAYGATSSSS PALYQSRLDA SAAARRHSEM PRSSINPSYE  60
DHYRRISTPY EQHSSANAYS LAPGQNIPSI SGLTQNPSMT SSSGSPAMSQ HAVRSPNTYE  120
ASMYTQAYSA TPQSTQMYEP SAQAMGYPSP YMGSSVNPVA SKPSGNDPSS IRVLNQRPKP  180
QCWEHGCNGR QFSTFSNLLR HQREKSGTAS KSSCPRCGAG QYLSPPCRAL LVSISGVVPE  240
S