PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923610.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 299aa    MW: 33557.7 Da    PI: 4.7999
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.39.9e-07172216655
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +++ r RR++i ++ +eL +l+P         +l+ ae+   A +Y+k+Lq
  XP_023923610.1 172 SIAARERRRKITEKTQELGKLIPGgH------RLNTAEMFHAAFNYVKYLQ 216
                     67889******************955......9*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MALSFCSNWD MTSFQPELAA DLLSFDYNLA LAQENYQLGS HFEQPDESSL YHVDSYTNLL  60
PYFSAAPSDN LISSGVHSPE MFLLDESYSY QYPKRQRTST YGGGNSNYYH SNFTPGFYDG  120
YVPNPSDLVP ESMPEVMAQF LVSSSNYGCG SSTSSPQSSV KKPMKVSLSA QSIAARERRR  180
KITEKTQELG KLIPGGHRLN TAEMFHAAFN YVKYLQAQAS VLQLMGSIQE IKEEPITNYS  240
REELQALIAS PIIQEKLSSQ EKCLVPKEFL QILADDKEVQ LKPFIVKDID QLLQTKTDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.16e-34bHLH family protein