PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923893.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 189aa    MW: 19865 Da    PI: 5.3777
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.7e-05163186123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C+k+F +   L++H +  H
  XP_023923893.1 163 FSCQTCSKTFGSEVGLQSHTMAkH 186
                     89*****************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MCSVILELEF EAQSGDLLLG FFDPLGGTDE GTTAVEAEVG GPTSIVAMKR ALMRDVVLAK  60
RGQTKDEDDD DISGDEDMSF GSAEDDDEPK ETPKNVESSK KRPSESATKT AVPAKKAKVA  120
TAQKTDGKKV GGHTTPHPSK KAAKTPTTSE QSKQKSPKSG GSFSCQTCSK TFGSEVGLQS  180
HTMAKHAGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.13e-07C2H2 family protein