PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924007.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 315aa    MW: 35037.9 Da    PI: 5.8108
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-094089154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +++ +k+L
  XP_023924007.1 40 RKVQKADREKLRRDRLNEQFLELGNTLDPD----RPKNDKATILNDTIQMLKDL 89
                    5677889********************997....79****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDQWKTDNNN FTAELAPSTC APSNPRQSVD VEIKDPIAAR KVQKADREKL RRDRLNEQFL  60
ELGNTLDPDR PKNDKATILN DTIQMLKDLT GEVNRLKVEY AALTEESREL TQEKTELREE  120
KASLKSDIEN LNVQYQQRLR VMFPWAAMDP SVVMGPPYSY PVPVPVPSGP IPMHPSLQPF  180
PFFGNHTTGG IANPCSTFIP YPTPPNPPVE QPSAQYASTS QISSKQDSKS KSSDHQRGSN  240
VERCDDSNDV ATELELKMPG SSVQQDLSSE GRKGKQSQRK ERSATEISSS SRYSSSQGHQ  300
ESSSNSVGDM PKSKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-65bHLH family protein