PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924062.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Dof
Protein Properties Length: 314aa    MW: 34830.4 Da    PI: 9.2656
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof113.78e-3651110362
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     ++ lkcprC+stntkfCyynny+ sqPr+fC+aC+r+WtkGG+lrnvPvGggr+++++++
  XP_023924062.1  51 SDPLKCPRCESTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRHKK 110
                     6789************************************************98888765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGLSSKQVSS DGVDWSQTLL QTQSLELPKP PPMRRQQQQQ QQQQQNQQQQ SDPLKCPRCE  60
STNTKFCYYN NYNKSQPRHF CRACKRHWTK GGTLRNVPVG GGRKNKRHKK STTAASASTS  120
TSTANAATTN STNTNINNRL AAHMLIEAQQ QRQNLPALSL GDQKCISEIL FHSLIRPPSS  180
MQHQNLINSS NNMDSKNFSS NSNIHLGSTL PLPSGQSLHF PFSSSSSFNT NPSSISTSLH  240
SSSGVNYTEG FKTIEEPTIT SIMANTSNSA PQPWQVPTTA SSSMDMTTYW NWDDIDTFAS  300
TDLNLPWDDS DIKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.21e-28Dof family protein