PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924136.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Trihelix

Protein Properties

Length: 897aa MW: 99379.9 Da PI: 8.7506

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.4	8.8e-19	812	892	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev++Li++r e++++++ k +++lWe++s + + g++rsp qCk+ w +l +y++ k+g+++ +++p+f+++ XP_023924136.1 812 KWKPEEVKKLIDLRGELHSKFQVVKGRMALWEQISGSLLSDGINRSPGQCKSLWTSLVLKYEESKNGKES-----MESWPFFEDMS 892 7**************************************************************99998.....467****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 897 aa Download sequence
MKSAFRDGFA PSSALSSHQR MAAFGALSLC PYSLLCCPKY TTKRFVSCSV GSHTSSIDTR 60 RSKVPRKRSG KMDGSRKSME DSVQRKMEQF YEGSDGPPLR VLPIGGLGEI GMNCMLVGNY 120 DRYILIDAGV MFPDYDELGV QKIVPDTTFI KRWSHKIEAV VITHGHEDHI GALPWVIPAL 180 DSRTPIFASS FTMELIKKRL KENGIFVPSR LRVFRTRRKF VAGPFEIEPI RVTHSIPDCC 240 GLVLRCADGT ILHTGDWKID ETPLDGKVFD REALEELSKE GVTLMMSDST NILSPGRTIS 300 ESVVANSLLR RISEAKGRVI TTQFASNIHR LGSVKAAADL TGRKLVFVGM SLRTYLDAAW 360 KDGKAPIDPS TLVKIEDIDA YAPKDLLIVT TGSQAEPRAA LNLASYGGSH SLKLSKEDVI 420 LYSAKVIPGN ESRVMKMLNR ISEIGSSIVM GKNEGLHTSG HGYRGELEEI LQIVKPQHFL 480 PIHGELLFLK EHELLGRSTG IRHSCVIKNG EMLGVSHLRN RRVLSSGFTS LGKENLQLMY 540 SDGDKAFGTS SELCIDERQR IASDGIIVVS MEILRPQNVD GMIGNSLKGK IRITTRCLWL 600 DKGKLLDALH KAAHAALSSL PVNCPLSHIE RTVAELLRKM VRKYSSKRPE VIAIALENPA 660 AVLSDEVNAR LSGKSHVGYG TSALRKVVDG HSEENQSNRM HTEDIANIQL EHSLLKNLKG 720 EGNELERLQP EEDTIASSSS LAERPFSNSE DSDDFWKAFV TSSSPVDEVA KDNNGFVPRS 780 KHVSMVEKDS VESDKDESSK LPNSSKPVKR NKWKPEEVKK LIDLRGELHS KFQVVKGRMA 840 LWEQISGSLL SDGINRSPGQ CKSLWTSLVL KYEESKNGKE SMESWPFFED MSKILSN

Sequence ? help Back to Top

Protein Sequence Length: 897 aa Download sequence

MKSAFRDGFA PSSALSSHQR MAAFGALSLC PYSLLCCPKY TTKRFVSCSV GSHTSSIDTR  60
RSKVPRKRSG KMDGSRKSME DSVQRKMEQF YEGSDGPPLR VLPIGGLGEI GMNCMLVGNY  120
DRYILIDAGV MFPDYDELGV QKIVPDTTFI KRWSHKIEAV VITHGHEDHI GALPWVIPAL  180
DSRTPIFASS FTMELIKKRL KENGIFVPSR LRVFRTRRKF VAGPFEIEPI RVTHSIPDCC  240
GLVLRCADGT ILHTGDWKID ETPLDGKVFD REALEELSKE GVTLMMSDST NILSPGRTIS  300
ESVVANSLLR RISEAKGRVI TTQFASNIHR LGSVKAAADL TGRKLVFVGM SLRTYLDAAW  360
KDGKAPIDPS TLVKIEDIDA YAPKDLLIVT TGSQAEPRAA LNLASYGGSH SLKLSKEDVI  420
LYSAKVIPGN ESRVMKMLNR ISEIGSSIVM GKNEGLHTSG HGYRGELEEI LQIVKPQHFL  480
PIHGELLFLK EHELLGRSTG IRHSCVIKNG EMLGVSHLRN RRVLSSGFTS LGKENLQLMY  540
SDGDKAFGTS SELCIDERQR IASDGIIVVS MEILRPQNVD GMIGNSLKGK IRITTRCLWL  600
DKGKLLDALH KAAHAALSSL PVNCPLSHIE RTVAELLRKM VRKYSSKRPE VIAIALENPA  660
AVLSDEVNAR LSGKSHVGYG TSALRKVVDG HSEENQSNRM HTEDIANIQL EHSLLKNLKG  720
EGNELERLQP EEDTIASSSS LAERPFSNSE DSDDFWKAFV TSSSPVDEVA KDNNGFVPRS  780
KHVSMVEKDS VESDKDESSK LPNSSKPVKR NKWKPEEVKK LIDLRGELHS KFQVVKGRMA  840
LWEQISGSLL SDGINRSPGQ CKSLWTSLVL KYEESKNGKE SMESWPFFED MSKILSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein