PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924490.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 444aa    MW: 50434 Da    PI: 9.3497
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.21.5e-1823114199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +p     +g l++pkkf++++g +   s    l+ ++g +W+vk+  +k++g++++++GW eF++ + L  g  +vF+++g+s f  +v 
  XP_023924490.1  23 FFKIVMPQTLQ-EGKLRIPKKFISKYGVD--LSNLAFLTVPNGTKWKVKM--TKRDGEVWFQNGWCEFASCHALTLGHLLVFRYEGNSHF--YVL 110
                     77877665555.556***********877..788999999**********..**********************************9999..**9 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f++
  XP_023924490.1 111 IFDA 114
                     9987 PP
2B361.41.5e-19249345198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f  v+ ps+v   + l+++ +fa++++ k  ++  ++l++++g +W+vk+++ k + +  ++ GWk+F+++n+Lk+ D+++F+l++  e  ++v+
  XP_023924490.1 249 FMVVMQPSYVCPGHSLSISSSFAKKYMRK-MSGEFVILRSLNGGTWSVKFSFYKAQTKAKFRLGWKKFARDNNLKVADVCIFELINGVEVAFKVS 342
                     778999********************655.56678*************************************************98766668999 PP

                     EE- CS
              B3  96 vfr 98 
                     +f+
  XP_023924490.1 343 IFQ 345
                     887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MTFQWRRDNE DGPADLTAKT PHFFKIVMPQ TLQEGKLRIP KKFISKYGVD LSNLAFLTVP  60
NGTKWKVKMT KRDGEVWFQN GWCEFASCHA LTLGHLLVFR YEGNSHFYVL IFDATATEIE  120
YPFDYQHQVR RMEDIERDDI DNSLEIVDGF MPSRKTSEKS PLPCPLPQKR AKTNPRSSVL  180
QAGDTHFRPE LTKSKGSVLE KSKMNAAEER SGATKRCPKS EVIERTLSAS EKDRALQRVR  240
AFESKNPFFM VVMQPSYVCP GHSLSISSSF AKKYMRKMSG EFVILRSLNG GTWSVKFSFY  300
KAQTKAKFRL GWKKFARDNN LKVADVCIFE LINGVEVAFK VSIFQAANDI DCPLLNGSPH  360
GVGRNQVGRK SSLLVKPESD CNLDDVSLSH DKCPGILFFD RMSDEVLDSI RTELQHMGKL  420
SIRHDADCII RCSALPFKEM VGNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-57B3 family protein