PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924515.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 191aa MW: 22097.9 Da PI: 7.5729

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++ +G g W+t a+ g++Rt+k+c++rw++yl XP_023924515.1 17 KGPWTIEEDMILINYIANHGEGVWNTLAKSAGLKRTGKSCRLRWLNYL 64 79********************************************97 PP
2	Myb_DNA-binding	58.6	1.4e-18	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+v++++++G++ W++Ia++++ gRt++++k++w++ XP_023924515.1 70 RGNITAEEELLIVELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 113 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MERNKLCNSS QDAEVRKGPW TIEEDMILIN YIANHGEGVW NTLAKSAGLK RTGKSCRLRW 60 LNYLRPDVRR GNITAEEELL IVELHAKWGN RWSKIAKHLP GRTDNEIKNY WRTRIQKHIK 120 QAENLQGQTS EVNDQASSSQ ASGMAQPMDV YSPPLYQRTM EPIQVPLPNP ESNETFWSME 180 DIWSMQLFNG D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	5e-82	MYB family protein