PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924579.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Dof

Protein Properties

Length: 487aa MW: 53667.6 Da PI: 6.4541

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.8	2.1e-37	108	169	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++k+l+cprC+s +tkfCy+nny+++qPr+fC++C+ryWt+GG++rnvPvG+grrknk+sss XP_023924579.1 108 PNKILPCPRCNSLETKFCYFNNYNVNQPRHFCRKCHRYWTAGGTIRNVPVGAGRRKNKHSSS 169 67899*****************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MSQVGDPAIK LFGRNIPSVC LQHSDSDCHT PSIPPLMYEF EATTKAEVDE HLIEKPCKGD 60 IPSGLDNQED IKCQNHPLEN EANVDKKSEE DQVTNSEIGD QEKVLKRPNK ILPCPRCNSL 120 ETKFCYFNNY NVNQPRHFCR KCHRYWTAGG TIRNVPVGAG RRKNKHSSSQ CHQVVVPPNV 180 VSVTRADTLT SASSQHHSCT GLPSFSKGTG EILKFSKDAP LCESMANVLN LKEQKGSVEI 240 GSSVVEDNSE EPLSSESSLA AVTSEESEFS EKEFKPDGLP GHCRNFNPMH TMQCYPVPQW 300 AYHWNQGWHT MMFGLNNCIS NSTHMSSTPV VPVPGFSAPS ITFPFLPASY WGCMPSWDTR 360 NWNTSLFGST GSSSASSSTS NNSSSGNSSP ILGKHSRDAN SQVEDTTEQN LWVPKTLRID 420 DPEEAAKSSI WSTLGIRPDK DKPIIKGGIF KAFQSKSDTT SHTSDTDQVL QANPAAFSRS 480 QSFREST

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MSQVGDPAIK LFGRNIPSVC LQHSDSDCHT PSIPPLMYEF EATTKAEVDE HLIEKPCKGD  60
IPSGLDNQED IKCQNHPLEN EANVDKKSEE DQVTNSEIGD QEKVLKRPNK ILPCPRCNSL  120
ETKFCYFNNY NVNQPRHFCR KCHRYWTAGG TIRNVPVGAG RRKNKHSSSQ CHQVVVPPNV  180
VSVTRADTLT SASSQHHSCT GLPSFSKGTG EILKFSKDAP LCESMANVLN LKEQKGSVEI  240
GSSVVEDNSE EPLSSESSLA AVTSEESEFS EKEFKPDGLP GHCRNFNPMH TMQCYPVPQW  300
AYHWNQGWHT MMFGLNNCIS NSTHMSSTPV VPVPGFSAPS ITFPFLPASY WGCMPSWDTR  360
NWNTSLFGST GSSSASSSTS NNSSSGNSSP ILGKHSRDAN SQVEDTTEQN LWVPKTLRID  420
DPEEAAKSSI WSTLGIRPDK DKPIIKGGIF KAFQSKSDTT SHTSDTDQVL QANPAAFSRS  480
QSFREST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-67	Dof family protein