PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924686.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Trihelix

Protein Properties

Length: 323aa MW: 36669.2 Da PI: 5.1183

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.3	3.1e-16	41	131	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +Li+a ++ +l+rg+l++++W++v++++ + ++ +r+ +qCk++++ ++k+yk +k++ ++ + + +s++ +fd+l+ XP_023924686.1 41 CWSEDATSTLIDAWGRRYMELNRGNLRQKDWQDVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLTSSWIFFDRLD 131 7**************************************99999**********************9999888899*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGDLTDTLMP STTPPIPTLA LTAPNAATPQ SSRPLPVRED CWSEDATSTL IDAWGRRYME 60 LNRGNLRQKD WQDVADAVNA LHGHTKKTHR TDVQCKNRID TIKKKYKIEK ARVSSSNGTL 120 TSSWIFFDRL DSLIGSNVTV KKPATSTPVP IQIQHPPSLS QSPPVGVPLY YKKAMTPSPS 180 NAVVAALPQK RPSPAMDEGF FRRNYSAMAA AAAAAEADDV EDEEDEEEEE EEEVEGDVEE 240 RESEEVVVER EGMRRLARAI ERFGEVYERV EREKLRQMVE LEKQRMQFAK DLEVQRMNMF 300 MDTQVQLERI KHAKRSRSND MYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	8e-59	Trihelix family protein