PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924715.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 164aa    MW: 17852.5 Da    PI: 5.9117
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS143.71.8e-4414161226374
            GRAS 226 evLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                       L+l+  l+Pk++++veq+++h ++ Fl+rf++al+yysalfd+l   +l+ +s er++vE++l+g ei+n+va  g +r+  +e++e+W + l
  XP_023924715.1  14 GALRLLTMLRPKLITIVEQDLSH-GGGFLARFVDALHYYSALFDALgGDGLGGDSIERHMVEQQLFGCEIRNIVAVGGPKRTG-EEKVERWGHEL 106
                     5799*******************.678*******************999******************************9665.577******** PP

            GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +++GF pv+l  + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+
  XP_023924715.1 107 GRVGFCPVSLAGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 161
                     ******************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MHHCLYDITG SDLGALRLLT MLRPKLITIV EQDLSHGGGF LARFVDALHY YSALFDALGG  60
DGLGGDSIER HMVEQQLFGC EIRNIVAVGG PKRTGEEKVE RWGHELGRVG FCPVSLAGNP  120
AAQASLLLGM FPWKGYTLVE ENGCLKLGWK DLSLLTASAW QPAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-65GRAS family protein