PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924736.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 168aa    MW: 18779.8 Da    PI: 9.9979
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924736.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.8e-111258554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  rE+ RRdr+N++f eL ++l +    + +K++Ka iL  Av+ + +L
  XP_023924736.1 12 KACREKMRRDRLNDRFMELGSILDPG---RPPKMDKAVILGDAVRMLTQL 58
                    678**********************8...89**************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
VRSGSCTTSG SKACREKMRR DRLNDRFMEL GSILDPGRPP KMDKAVILGD AVRMLTQLRD  60
EAQKLKESKM DLQEKINELK AEKNELRDEK QRLKVEKENL EKNVKALSTQ PGYLPHPPAI  120
PAPFSAPGQV VGSKLVPFMG YPGVSMWQFM PPASVDTSQD HVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-74bHLH family protein