PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924744.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 240aa MW: 27419.3 Da PI: 7.0307

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.7	5e-09	51	100	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ R ++iN+ ++ L +llP+a +++Kls +++ + v+YI +Lq XP_023924744.1 51 YHNASKCDRCKKINTLYSSLHTLLPPA--DQAEKLSIPATVSRMVKYIPELQ 100 58888888****************5..5*****************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MESEIEIYAP GRRSQIALKW SLQQTDPKLE PSCSTISTSI GSSPTMVKKL YHNASKCDRC 60 KKINTLYSSL HTLLPPADQA EKLSIPATVS RMVKYIPELQ QQVDILIQKK EELISRICRQ 120 GEQIHQENQR QIASWSSLSA VSASWLNDRK VMIQISTYKV HKSPLAEILP NLEEDGFLIL 180 NASSFESFGG RVFYNLHLQA ERTYALKREV LSEKLLSFSE RGEEINYENL GSIYFNDDLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	2e-46	bHLH family protein