PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925006.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 327aa    MW: 36012.9 Da    PI: 5.2759
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.7e-13103154155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI++Lq
  XP_023925006.1 103 QKVSHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 154
                     6899*************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGDSLSGFFD ENEFGESNLG SDDLFSNDLF NIFESLEGVV EFPPIDEVVV GSGEETPRLV  60
SQKSASSCSA LQESETEFEI SPKSSKRPKL MTSSDEANPE GQQKVSHITV ERNRRKQMNE  120
HLSVLRSLMP CFYVKRGDQA SIIGGVVDYI NELQQILQSL EAKKQRKVYT EVLSPRLIPS  180
SSPRPSPLSP RKPPLSPRLN LPISPRTPQP TSPYKPRVQQ GYLSPTMATS LEPSPSSSST  240
SSNINDNINE LVANSKSPIA DVEVKFSGPN LLLKTVSPPI PGQAMKIIST LEDLSLELLH  300
VKISTVDETM LNFFTIKVKR LLLALQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.11e-81bHLH family protein