PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925172.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GeBP
Protein Properties Length: 213aa    MW: 24550.4 Da    PI: 4.318
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.42.6e-1583174597
          DUF573   5 rlwseeD.eivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                     ++ ++ D ei +L  +++f++k    p++d   + +f+k+ ++++ s++ql+e i +L+kK+k+  +k   g + +fs + dq +f++++k+W 
  XP_023925172.1  83 MVLTDVDyEIGFLTSIVNFHEKYMLYPYSDSVSLEHFIKNWLQIETSNQQLLEVIMKLRKKYKNANTK--MGASENFSDTRDQMAFNFAHKLWS 174
                     677777779********************************************************999..99999******************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MQEEEVPNVP ENPTSIPPDA SHAEKIEDEE DEYMDLMAVS PSPESPSKRP FHDSDEENTQ  60
RMEKRLKTKV PEDDTPPRTF LEMVLTDVDY EIGFLTSIVN FHEKYMLYPY SDSVSLEHFI  120
KNWLQIETSN QQLLEVIMKL RKKYKNANTK MGASENFSDT RDQMAFNFAH KLWSSEKEEE  180
WKFLKMGIIA PVLHGPDDEE PDCAGGGRDP GCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-06GeBP family protein