PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925231.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 251aa MW: 28576.8 Da PI: 9.3319

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62.2	1.7e-19	59	169	1	109
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLp.k..kvkaeek...ewyfFskrdkkyatgkrknratk..sgyWkat 86 lp+GfrF+Ptd+elv+++L+++ gk++++ +++ke+d+y k ePw++ + +v++ ++ ++yfF+k k+y++g+r r + sg+Wk+ XP_023925231.1 59 LPVGFRFNPTDDELVTHFLRNRNLGKPTPF-NAVKECDLYgKKEPWEIWdMfsAVDG-SRvvrQLYFFTKL-KTYNNGRRIDRRVGsgSGTWKKE 150 79***********************999.89*99456*733432222.2234377999887.568999999996543489987 PP NAM 87 gkdkevlskkgelvgl.kktLvfy 109 + k+ lvg+ k + + XP_023925231.1 151 HQLKT-----PGLVGVeKSRFSYE 169 66333.....22344303334433 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MADREETERE THSSSSSDHR ETQRETQTRS SMAITVPVAS KKKNKKNNNN EDMIMENELP 60 VGFRFNPTDD ELVTHFLRNR NLGKPTPFNA VKECDLYGKK EPWEIWDMFS AVDGSRVVRQ 120 LYFFTKLKTY NNGRRIDRRV GSGSGTWKKE HQLKTPGLVG VEKSRFSYEN NDDKSSKSSS 180 SSSSSSSGRN GKWNLIEYKD LNPPNQDEIV KLRMSVGKEE KQGKWKFGTC VTSNPIDCWC 240 AGLPADLAYS G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	7e-16	NAC family protein