PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925270.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 397aa    MW: 43557.4 Da    PI: 7.3247
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925270.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.5e-053013381254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + a++L++A+ YI+ L
  XP_023925270.1 301 RKEKLGDRIAALQRLVAPF-----GKTDTASVLTEAIGYIQFL 338
                     7778899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MDSANFHHQH QLQEQLAEYF TSAAQSGYKA STTHDWIPSI VLNNGSNNNS YLTENIPNMW  60
PKCTINEQLL RPSMNEDSSF SNARSTQQSA DELLCAKIKE EMPDTFPKLS EMICNPSSSE  120
ESHSLSIRNE LQSSRNNLWL SNLSTGRQII GQPSAGDLYS NTQNPASFGS VAGSSRYNFS  180
HVLPSTNSSP SDLSSSLVSS SSLGLSLQTL DLLTSTNYGG SFSQSSHDIF GIRRDRMSLS  240
PDHMQELADS PSNSSNKTTA FMNGVTRKKR ASSVSEPKES HAVAKKSQSG SRCSCPPLKV  300
RKEKLGDRIA ALQRLVAPFG KTDTASVLTE AIGYIQFLHD QVQTLSMPYM KISHSKPNRA  360
MQTGLSDKDG TELERDLKSR GLCLLPLSYA SYISGYE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-42bHLH family protein