PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925587.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 309aa    MW: 33188.4 Da    PI: 5.808
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.61.7e-182558135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+nCgt++TplWRr+++g+  LCnaCGl+ +++g+
  XP_023925587.1 25 CQNCGTSTTPLWRRDESGSV-LCNACGLFLKLHGR 58
                    ********************.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MQSQYAPAAT AGGQSNQQNG GPPVCQNCGT STTPLWRRDE SGSVLCNACG LFLKLHGRPR  60
PISLKTDVIK SRNRVKTLPP KKRDSTDGQQ GGYPAAHPDV AHASLHLHSH HPVGDGPPRL  120
PSPNSYSHGD PTALSQNPNI APQHIFDTVS LPSDSFASPS IPAFALRPAS PSASSVNGTS  180
HLEPPQSYDA VVAQNKDFRT RVSELEVIND LFRGRVSELE QSEQEARGQS QSKAEELERT  240
KSDLEAADRR IKELEKRLAE YESDEGRARK KARVEETVEV DDVAGEGLAD AAPAPDASAV  300
EEASTEGPQ