PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925879.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Dof

Protein Properties

Length: 323aa MW: 35877.2 Da PI: 7.4824

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.1	9.1e-39	39	98	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s XP_023925879.1 39 NHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKAKRS 98 57899****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MQDIQAIGGG RLFGGGDRRV RPNHHHQHNQ HHHHTQTQNH QALKCPRCDS LNTKFCYYNN 60 YNLSQPRHFC KSCRRYWTKG GVLRNVPVGG GCRKAKRSKP KPNSSDASTP QTQRREPKSN 120 SHSSSESSSL TATTNTATEA VSAVTDRSLN SAPNLLNVQD SKLFGSSSSY EQGLLEQGSD 180 CGIFSEIGSF TSLITAPSNE TLAFGFNTVS DITTTPFRLN HHQSQSENQE WQNHHHQQQQ 240 QQKGMGLIGD ELKMQEEIAG GLLDQTVHVD LSSLQNRSSG AGFGSLDWQA STGDQVLFDL 300 PNTVDQAYWS QWTDQDHSTL YLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	8	16	GGGRLFGGG
2	9	17	GGGRLFGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	1e-56	Dof family protein