PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925938.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 898aa MW: 103387 Da PI: 8.4363

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.7	3.4e-22	106	190	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA ++GFsvrk+k ++ ++ + +r++vCskeg+++++++ ++++ ++ +trt+C+a+++ + + +++w+vt+++ HnHela XP_023925938.1 106 LYNDYAIRIGFSVRKEKIRYA--KNVVRQRDYVCSKEGFPRDSDNL-DDKKFKKLQTRTSCEASIRFTVT-NDEWKVTHFNPTHNHELA 190 7**************9998..6679***********9998.99999*************9.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
MVRSRGRRRW FEVEGRRRWV VGLGLGRRSG CGSGSKIGGS WVFVGRRRVA LVSLFSPMTE 60 VVAGIQCSPS QLTMADQDIR VNAEGVEDIE TLLGMVVHSE DEAYKLYNDY AIRIGFSVRK 120 EKIRYAKNVV RQRDYVCSKE GFPRDSDNLD DKKFKKLQTR TSCEASIRFT VTNDEWKVTH 180 FNPTHNHELA KPEERPFLRS NRKVTDAQLG VIKTFKEAGI RTISAYSYLV EEAGGFENVG 240 FIKRDCYNVV NKHKLINVEA GDAQSLVNHF KQKQAEDPMF FYAIQVDQEN RMTNFFWRDG 300 RSRIDYNSFG DVICFDTTYR TNKYNMICAP FVGVIHHWKN VLFGCAFLLD ETTVFFTWLF 360 ETFLESMGNK KPKTIFTDQC QAMKNAIRVV FPDTCHRLCL WHISKNAAEN LPRHYGIPEF 420 KSRFNKILYN CETESEFESS WDALLKDYNL VGNKWLNTLY ENQEMWCSVF SHNIFSARMK 480 ASSRSESVNN VFQHMACKTM TLTEFIHEYE KASKNMRVEE LEEDFRCKQG TSSQIVKNCG 540 LLEHALSVYT RTFFKRFELE IASTLGVTHQ DVYSDGESFT YEVIEGGGHR VRVVQFNSNN 600 VVTCSCKMFE TLGLLCRHAL RILIVKNVTE LPSQYILKRW TKDAKKDSVL CDHVKPASAN 660 DELSVTSRRN ELMRSVYEIF TKSAATTRHT EMCQRKVREM IELVENDMEQ LNAARDGDEK 720 ENMIVANNVF DDVEKTDCSL NSLPILDPPC VRPKGVTNAR LKSKLEKHKR KPLKDVTRSK 780 QLSTRGLPTS SSHAPKGFCQ PKHPSSVSMD ESYNNQVFLP LAMPTTISPS HFQHPNQNPF 840 SYWSSASPNF SFTSMLQSND FLNHLSQNSF SNGFTQLNSR QKLFDLEVII SVFNLEDF

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

MVRSRGRRRW FEVEGRRRWV VGLGLGRRSG CGSGSKIGGS WVFVGRRRVA LVSLFSPMTE  60
VVAGIQCSPS QLTMADQDIR VNAEGVEDIE TLLGMVVHSE DEAYKLYNDY AIRIGFSVRK  120
EKIRYAKNVV RQRDYVCSKE GFPRDSDNLD DKKFKKLQTR TSCEASIRFT VTNDEWKVTH  180
FNPTHNHELA KPEERPFLRS NRKVTDAQLG VIKTFKEAGI RTISAYSYLV EEAGGFENVG  240
FIKRDCYNVV NKHKLINVEA GDAQSLVNHF KQKQAEDPMF FYAIQVDQEN RMTNFFWRDG  300
RSRIDYNSFG DVICFDTTYR TNKYNMICAP FVGVIHHWKN VLFGCAFLLD ETTVFFTWLF  360
ETFLESMGNK KPKTIFTDQC QAMKNAIRVV FPDTCHRLCL WHISKNAAEN LPRHYGIPEF  420
KSRFNKILYN CETESEFESS WDALLKDYNL VGNKWLNTLY ENQEMWCSVF SHNIFSARMK  480
ASSRSESVNN VFQHMACKTM TLTEFIHEYE KASKNMRVEE LEEDFRCKQG TSSQIVKNCG  540
LLEHALSVYT RTFFKRFELE IASTLGVTHQ DVYSDGESFT YEVIEGGGHR VRVVQFNSNN  600
VVTCSCKMFE TLGLLCRHAL RILIVKNVTE LPSQYILKRW TKDAKKDSVL CDHVKPASAN  660
DELSVTSRRN ELMRSVYEIF TKSAATTRHT EMCQRKVREM IELVENDMEQ LNAARDGDEK  720
ENMIVANNVF DDVEKTDCSL NSLPILDPPC VRPKGVTNAR LKSKLEKHKR KPLKDVTRSK  780
QLSTRGLPTS SSHAPKGFCQ PKHPSSVSMD ESYNNQVFLP LAMPTTISPS HFQHPNQNPF  840
SYWSSASPNF SFTSMLQSND FLNHLSQNSF SNGFTQLNSR QKLFDLEVII SVFNLEDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-120	FAR1 family protein