PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023926610.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 450aa    MW: 51309.8 Da    PI: 9.5897
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023926610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.91.8e-137643899
                    EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    l+ +sg +W+v++  + ++g+++l+kGW+eF+k   +k+g f++F+++g+s f  +v +f++
  XP_023926610.1  7 LKLPSGAEWKVEM--TEHDGEVWLKKGWQEFAKYYSVKQGHFLLFRYEGNSHF--HVLIFDA 64
                    66799********..**********************************9999..****997 PP
2B359.65.3e-19180278199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f  v+ ps+ + + +l++p +fa+++ +kk++  + +l  ++gr+W vk++     ++ +++++ GW+ F+k+n+L++gD++vF l++ ++ +++
  XP_023926610.1 180 FMVVMQPSYLHPKLCLSIPIDFASRYLNKKHG--DAILCISDGRKWPVKYTCqmFATKPKFFFKCGWRTFAKDNNLEVGDVCVFGLSEGTKMSFK 272
                     677899999999989***********766655..68888889********77565566679************************9965666668 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v +fr 
  XP_023926610.1 273 VVIFRV 278
                     888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MSNLAFLKLP SGAEWKVEMT EHDGEVWLKK GWQEFAKYYS VKQGHFLLFR YEGNSHFHVL  60
IFDASATEIE YSLNSSHGEE GELNEEFRGP KMEEIESDSA VEILGWFPPC SKRRDKSPLP  120
CLRPHKKMKT NPTAKGLKGI STTEQCSNSK VVRRIQPLNN SKIARALPRA SAFKPKDPYF  180
MVVMQPSYLH PKLCLSIPID FASRYLNKKH GDAILCISDG RKWPVKYTCQ MFATKPKFFF  240
KCGWRTFAKD NNLEVGDVCV FGLSEGTKMS FKVVIFRVSE EHCLPLPVPA LDNEVNQVEP  300
KRTLKYELEY PSNHKIGMSS SGYKSTTKHL QHSQGDFTTE PQGTQSIDRK ISKLKRNLNS  360
PSSMRSFEGG LNFSAKEEGR GMPDSPRCPE SHGFRETQGL TYIEKARALK RACAFKSENP  420
YFMIVLQPSY IYGNNNLVSF QFKACRRITS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-40B3 family protein