PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023926623.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 321aa    MW: 36822.7 Da    PI: 10.6203
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023926623.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.11.6e-1823113199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk++    ++ s+ +++p  f+++++g    +k  +l+d++g+ W v l  +++ +r  +++GW+ F++++ L+ gDf++Fk++++s f   vk
  XP_023926623.1  23 FFKIF--LPNTCSHEISIPQAFIKHFNGT--IPKRAILKDQTGKFWHVGL--EQTNRRLCFKNGWQCFASDHSLEFGDFLIFKFSRSSLF--EVK 109
                     78888..677788889*******777766..6778***************..99999**************************9987777..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+k
  XP_023926623.1 110 IFSK 113
                     9987 PP
2B355.69.8e-18227317297
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     +kv ++s  lk + + +p  f++++    ++    ++ +  +rsW vkl    ++++ y l++GW+ F k+n LkegD++vF+l++r++  ++v 
  XP_023926623.1 227 IKVHITSALLKCAHMNVPSGFIKKYIRT-TR---TVMLQVANRSWPVKL--LVYPRTsYKLSAGWSAFMKENTLKEGDVCVFELIKRDDVVFKVN 315
                     6899999****************99533.33...45566689*******..5555555***************************9988877777 PP

                     EE CS
              B3  96 vf 97 
                     + 
  XP_023926623.1 316 IS 317
                     76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MVRPRKQRQR QRQPSFSEDN PEFFKIFLPN TCSHEISIPQ AFIKHFNGTI PKRAILKDQT  60
GKFWHVGLEQ TNRRLCFKNG WQCFASDHSL EFGDFLIFKF SRSSLFEVKI FSKTGCKKEE  120
AAPIGKPIPF VNLEEDSETE LTCSRPTRIG KRKRSEVGLK KIEAGGSSEA SRHKLKRTAG  180
TNLGKTPHFD RMYYGKPKQL IREDCTSSRA YLALEAARKV ISENPLIKVH ITSALLKCAH  240
MNVPSGFIKK YIRTTRTVML QVANRSWPVK LLVYPRTSYK LSAGWSAFMK ENTLKEGDVC  300
VFELIKRDDV VFKVNISRGL N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-29B3 family protein