PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023926847.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 241aa    MW: 26789.8 Da    PI: 7.5004
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023926847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-1990141155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr+++ +g ++AeIrdp++ng   r++lg++  +e+Aa a+++a+ k++g
  XP_023926847.1  90 PHYRGVRRRP-WGTYAAEIRDPKKNG--SRVWLGTYKKPEDAALAYDRAAFKMRG 141
                     68********.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDSDLAVLES IRQYLLGESE TFDQVEVCLG DIFTSETTNY WGSSPLKAED NNVNFGWVPS  60
NEVVDDPVKA KPRETNNKEA VAVAREAHAP HYRGVRRRPW GTYAAEIRDP KKNGSRVWLG  120
TYKKPEDAAL AYDRAAFKMR GCKAKLNFPH LIGSNMAEPP VRVTNKRRSP EPSSPSDNGL  180
AKSKRSRSRS GSVVQAESSN GSSSAIEEVS SEAFGSFSID TWYSSVNESF TMWPLDYTKL  240
L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184189KRSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-46ERF family protein