PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023926935.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 429aa MW: 49019.8 Da PI: 5.6767

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023926935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.3	4.3e-12	347	426	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY+e+Ak+ GF +r++++k + +++ + +g ++++++k +rr+ ++ rtgC+a+ ++ k+k +kw+v+ ++++HnH l XP_023926935.1 347 FYKEFAKKEGFGIRIRTMKGNAKKK-------NALDSGLSRDDENK---ARRSCSSLRTGCEAMRRIMKNKkLQKWVVKGFDNNHNHGLK 426 **************999985555.......33456777766555...89999*********999989************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MSGKIPTWIC NQTYSYGIFM ENHYFEGQIP CETITVEFLD ISHNLLDGSL PLWSSTQLRP 60 LHLEENNFSG LIPEPFLNMS ELLTLDISDN KLSRSIPSTI KTYFPGQYLT VLDTVFWFYK 120 AKYWEDFSLE FVGFFTYFLD VEVNFVSKYR LHSYKGGILT YMSGSIPKSF SNLIEVESLD 180 LSHNRLSGEI PPQLIELTFL AVFSVACNNL SGRTPDMKAQ FGTFDASSYD GNPFLCGVPL 240 EKTCGNNRDD SPPTPTQSSN VSDEKWQPFV DAVVTKCKHY FCEHCALKMF LVIVTKSQME 300 REELYDAPNN LGPLEQELPL EDIGDCELKS KPYVGMQFDS LDDVETFYKE FAKKEGFGIR 360 IRTMKGNAKK KNALDSGLSR DDENKARRSC SSLRTGCEAM RRIMKNKKLQ KWVVKGFDNN 420 HNHGLKSFF

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MSGKIPTWIC NQTYSYGIFM ENHYFEGQIP CETITVEFLD ISHNLLDGSL PLWSSTQLRP  60
LHLEENNFSG LIPEPFLNMS ELLTLDISDN KLSRSIPSTI KTYFPGQYLT VLDTVFWFYK  120
AKYWEDFSLE FVGFFTYFLD VEVNFVSKYR LHSYKGGILT YMSGSIPKSF SNLIEVESLD  180
LSHNRLSGEI PPQLIELTFL AVFSVACNNL SGRTPDMKAQ FGTFDASSYD GNPFLCGVPL  240
EKTCGNNRDD SPPTPTQSSN VSDEKWQPFV DAVVTKCKHY FCEHCALKMF LVIVTKSQME  300
REELYDAPNN LGPLEQELPL EDIGDCELKS KPYVGMQFDS LDDVETFYKE FAKKEGFGIR  360
IRTMKGNAKK KNALDSGLSR DDENKARRSC SSLRTGCEAM RRIMKNKKLQ KWVVKGFDNN  420
HNHGLKSFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	7e-11	FAR1 family protein