PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927004.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 234aa    MW: 25849.6 Da    PI: 4.6888
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.12.9e-1579127254
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                      y+ Vr++  +g+WvA Ir+p   + r k+ +lg+f+ta++A  a+++a+++++
  XP_023927004.1  79 NYRRVRQRT-WGKWVAKIREP---N-RgKKLWLGTFDTADDATSAYDEAARAMY 127
                     6999**999.**********8...3.35**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MEKSHMGYLD QGVPMESSKK RKTRGDELSV AETLAKWRDY NAQVDSSGDD AKRARKLSSK  60
GPKKGYMKGK GGAENLQCNY RRVRQRTWGK WVAKIREPNR GKKLWLGTFD TADDATSAYD  120
EAARAMYAAS ARLNFPESVS TMSGPTPAGF EASADGSTSS LVKDESTDNG LEELLAFSEN  180
ELFDAAELMA LLEDNHDFTD LVLDFGFDVN QLGFPDTEAD LPSLVDTEGR HEPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.22e-26ERF family protein