PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927010.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 229aa    MW: 24935.4 Da    PI: 4.3995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.9e-1773122154
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     + y+GVr++  +g+WvAeIr+p   + r k+ +lg+f+ a++Aa a++ a+++++
  XP_023927010.1  73 CNYRGVRQRT-WGKWVAEIREP---N-RgKKLWLGTFDAADDAASAYDDAARAMY 122
                     56*****999.**********8...3.35**********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGYLDQGVPM ESSKKRKTRG DELSVAETLA EWRDYNAQVD SSGDDAKRAR KLSSKGPKKG  60
CMKGKGGAEN LQCNYRGVRQ RTWGKWVAEI REPNRGKKLW LGTFDAADDA ASAYDDAARA  120
MYAASARRNS PESVSTMSGP TPAGFEASAD GSTSSLVKDE STDSGLEELL AFSENELFDA  180
AELMALLEDN HDFTDSVLDF GFDVNQLGFP DTEADLPSLV DTEGRHEPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.23e-24ERF family protein