PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927031.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 227aa    MW: 24969.8 Da    PI: 9.4669
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.1e-10135175346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +WT+ E+++l +a +  G+  W+ Ia+t++ +Rt+ ++k +w+k
   XP_023927031.1 135 PWTPAEEQRL-KALRDAGSS-WSEIAKTFP-TRTEGSVKKHWYK 175
                      8********9.578999999.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MASDIASVGM QNPYHQAYAY APSPHDQSAF AFPGQPHQYR PQLQTQQLPL PSHHHQHQHP  60
SLAQQSPNAR KRRVSDLNES MPGSLPGSAS SNASAYGLPQ TLVPGPSELD VGLGPSQGPS  120
QIPSPVAKKG RTNTPWTPAE EQRLKALRDA GSSWSEIAKT FPTRTEGSVK KHWYKDMHYA  180
EFAEDESAAL LQAIKDYENN KWKVIGQKVG KPAKACEQFA KEQGWKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09370.11e-09MYB family protein