PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927154.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 249aa    MW: 28497.4 Da    PI: 6.6063
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.37.6e-1569121155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++  +v+YI +Lq
  XP_023927154.1  69 KKLNHNASERDRRKKVNDLYSSLRSLLPGtD---RTKKLSIPKTVSSVVKYIPELQ 121
                     6789*************************66...9999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MLALSPSLVS TTRWYLENNH TNYDQNFNHV GDSETLESVL HFSTSQQAQV ELDRITPTIT  60
SYGDPKMHKK LNHNASERDR RKKVNDLYSS LRSLLPGTDR TKKLSIPKTV SSVVKYIPEL  120
QKEVKGLIHK KEELLSRISR LEDETLEEEN PKIIAQSTSI SIWASRIDNR QIVVQISIDG  180
KVHKTPLSEI LCNLEEDGLI LLNASSFESF GGRIFCNLHL QVERTHGLEC EILSEKLMSL  240
YDKREELLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.19e-59bHLH family protein