PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023927205.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 435aa MW: 47901.8 Da PI: 5.7435

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023927205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.7	5.7e-10	245	292	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_023927205.1 245 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 292 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MNRGFIQEEM LHSTDVTVLE RQRARMKWHQ DQQQQSYFGG TEFGGGGVVF QGHEGHYQVQ 60 NFQGLVGTGG GDLVLGEVVS QSVKVVDPAG LKNRWAELGR LELPDMGFES CGLVNGTGSE 120 FEMTAGANSR TLSCPPKAVV AAVAEPKGKV SVPVGKESSK KRKADKVQNS QVVVEDEPKD 180 KRSKLCAEDG ESKITEQTST KNTTADNNNN RESSSDTSKE NSKASEVQKP DYIHVRARRG 240 QATDSHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEIINYVQS LQRQVEFLSM 300 KLAAVNPRLD FNIEDFFGKE MFPACSTSFP TIGMSSEMTN PAYLQFNPAQ VVACCGLEMG 360 INSSDIALRR TISAPMSIPE TYIDTPCFTQ LQPSSTWDAD LQNLLNLEFH QGRSTSFPSQ 420 PFTGSIEASN LKMEM

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MNRGFIQEEM LHSTDVTVLE RQRARMKWHQ DQQQQSYFGG TEFGGGGVVF QGHEGHYQVQ  60
NFQGLVGTGG GDLVLGEVVS QSVKVVDPAG LKNRWAELGR LELPDMGFES CGLVNGTGSE  120
FEMTAGANSR TLSCPPKAVV AAVAEPKGKV SVPVGKESSK KRKADKVQNS QVVVEDEPKD  180
KRSKLCAEDG ESKITEQTST KNTTADNNNN RESSSDTSKE NSKASEVQKP DYIHVRARRG  240
QATDSHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEIINYVQS LQRQVEFLSM  300
KLAAVNPRLD FNIEDFFGKE MFPACSTSFP TIGMSSEMTN PAYLQFNPAQ VVACCGLEMG  360
INSSDIALRR TISAPMSIPE TYIDTPCFTQ LQPSSTWDAD LQNLLNLEFH QGRSTSFPSQ  420
PFTGSIEASN LKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	6e-65	bHLH family protein