PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927209.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 100aa    MW: 11476.9 Da    PI: 9.4345
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-101458344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+e  +++ +a +++ ++   +W  +a+ +g ++t++++k ++
   XP_023927209.1 14 SWTPEQNKRFEKALALYDKEtpdRWQNVAKAVGGNKTAEEVKRHY 58
                     7*****************99************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MASSSLSKQN SSSSWTPEQN KRFEKALALY DKETPDRWQN VAKAVGGNKT AEEVKRHYEI  60
LLEDLRHIES GLVPIPKYRS NGSSANIDEE ERLLKYLKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.19e-32MYB_related family protein