PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927263.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 130aa    MW: 14989.8 Da    PI: 8.0409
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.63e-243996259
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                    +Dgy+WrKYGqK +k+    rsY++C  ++C++kk+ e s+++p+ ++++Y+g Hnh 
  XP_023927263.1 39 EDGYEWRKYGQKFIKNIGKMRSYFKCQRSSCSAKKRAEWSTSEPNNLKVVYKGVHNHA 96
                    7********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MYVCMYNKDV LQVWREILEE GYTEEQDMDQ GGYRLVLPED GYEWRKYGQK FIKNIGKMRS  60
YFKCQRSSCS AKKRAEWSTS EPNNLKVVYK GVHNHALPAS ESGSSQLGTS SNANQYDLLT  120
QVFGDRSTAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.19e-17WRKY family protein