PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927282.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 244aa    MW: 28509.1 Da    PI: 5.7148
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.52.3e-2351137290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                      Yn+YA ++GFs+rk k ++   +++i +r+f Cskeg++ +e+   e+++ ++ etrtgCka ++ + e ++ w+vt ++ eHnHela
  XP_023927282.1  51 LYNNYALHTGFSIRKGKPRHFYGTKNIRQREFLCSKEGFKIDEDPC-EEKNWKKLETRTGCKAFIRFTVE-NDLWRVTAFNPEHNHELA 137
                     6***************************************999988.89999*****************9.9***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MEEPNFQSNG VICNSSDIEG IEDYLIFEQL ENSDDNLLDK VAYTEIEAYY LYNNYALHTG  60
FSIRKGKPRH FYGTKNIRQR EFLCSKEGFK IDEDPCEEKN WKKLETRTGC KAFIRFTVEN  120
DLWRVTAFNP EHNHELALPS ERHLLRSGRR ISKPKAGLID YLVNAGMRSS ELNEDFRCKQ  180
GAQQRAVKKS GILGHATQVY TCKILRLFEY EFLNSLAIEW KQVDCQDKID VFEVKEEDSE  240
RAQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-19FAR1 family protein