PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023927292.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 791aa MW: 90611.5 Da PI: 6.8576

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023927292.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	95.4	6.5e-30	79	175	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHel 89 fYn+YA++vGFs+r+s s++s+r+g i++r fvC keg+r +++k+ + + +r+raetr+gCka+l+vk ++ +++w+v++++ +HnHel XP_023927292.1 79 FYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVDKDKDkpghvDGRVKRPRAETRVGCKAMLVVKIQDshSARWVVSNFVRDHNHEL 173 9***************************************999999999999999************9998899************* PP FAR1 90 ap 91 +p XP_023927292.1 174 VP 175 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
MEFEPLTQLG NEVIEFDMIG LADDAMDIDH PLNVVDVHDD EDHLLHNSTS TTTTIPPPDT 60 NLEPFEGMEF ESEEAAKAFY NSYARRVGFS TRVSMSRRSR RDGAIIQRSF VCAKEGFRVD 120 KDKDKPGHVD GRVKRPRAET RVGCKAMLVV KIQDSHSARW VVSNFVRDHN HELVPPDKVH 180 CLRSHRHVSG SAKSLIDTLQ GAGIGPSGIM SALIKEYGGI SNVGFTERDC RNYMRSSRQR 240 TLGGDTQLLL DYLRNRQAVA ENRSLFYAVQ GDDEDQCMSN IFWADPKART NYTYFGDTVT 300 FDTTYRSNRY RLPFAPFTGV NHHGQPVLFG CALLINESEA SFVWLFKTWL EAMSGRPPVS 360 ITTDHDRVIR LAVTQVLPET RHRFCKWHIF KECQEKLSHV LSEHPNFEAE LHKCVNMTES 420 IEEFESCWFS LIDRYDLREH EWLQTIYVDR RQWVPVYLRD TFFAEMSITQ RSDSINSYFD 480 GYVNASTTLQ LFVKQYEKAL ESRYEKEVKA DYDTINTASV LKTPSPMEKQ AAELYTRKLF 540 MKFQEELVET MTFLATKVDE EVITTYQVAK FGENHKAYFV SFNIHEMKAT CSCQMFEFSG 600 LLCRHILTVF RVTNVLTLPS HYVLKRWTRN AKSGVILEER ASNLLNGSRE SLTVRYNNLR 660 NEALKFVDDG VKTAEIYNVA VGALQEAANK VALAKKNSRE SAFVNATGRE DCLHQGSVAT 720 NTCGGHQSGL EQPLSVDEQD RRIQKLAHQL ERAQRKCEVY RANLLSVLKD IEDQKLQLSV 780 KVQNIKLGMK D

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

MEFEPLTQLG NEVIEFDMIG LADDAMDIDH PLNVVDVHDD EDHLLHNSTS TTTTIPPPDT  60
NLEPFEGMEF ESEEAAKAFY NSYARRVGFS TRVSMSRRSR RDGAIIQRSF VCAKEGFRVD  120
KDKDKPGHVD GRVKRPRAET RVGCKAMLVV KIQDSHSARW VVSNFVRDHN HELVPPDKVH  180
CLRSHRHVSG SAKSLIDTLQ GAGIGPSGIM SALIKEYGGI SNVGFTERDC RNYMRSSRQR  240
TLGGDTQLLL DYLRNRQAVA ENRSLFYAVQ GDDEDQCMSN IFWADPKART NYTYFGDTVT  300
FDTTYRSNRY RLPFAPFTGV NHHGQPVLFG CALLINESEA SFVWLFKTWL EAMSGRPPVS  360
ITTDHDRVIR LAVTQVLPET RHRFCKWHIF KECQEKLSHV LSEHPNFEAE LHKCVNMTES  420
IEEFESCWFS LIDRYDLREH EWLQTIYVDR RQWVPVYLRD TFFAEMSITQ RSDSINSYFD  480
GYVNASTTLQ LFVKQYEKAL ESRYEKEVKA DYDTINTASV LKTPSPMEKQ AAELYTRKLF  540
MKFQEELVET MTFLATKVDE EVITTYQVAK FGENHKAYFV SFNIHEMKAT CSCQMFEFSG  600
LLCRHILTVF RVTNVLTLPS HYVLKRWTRN AKSGVILEER ASNLLNGSRE SLTVRYNNLR  660
NEALKFVDDG VKTAEIYNVA VGALQEAANK VALAKKNSRE SAFVNATGRE DCLHQGSVAT  720
NTCGGHQSGL EQPLSVDEQD RRIQKLAHQL ERAQRKCEVY RANLLSVLKD IEDQKLQLSV  780
KVQNIKLGMK D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein