PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927434.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C3H
Protein Properties Length: 258aa    MW: 29142.4 Da    PI: 7.7453
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.92e-09147171226
                     -S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                        +C++  +tG+C yGd+CkF+H+
  XP_023927434.1 147 QPDICKDSKETGYCGYGDSCKFMHD 171
                     567888889***************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
KPTFLHSQKK TIKPDNNLYF STGSSKNTSS TAAKEESKKK PIFQFESSKE IQVEHDSRAT  60
VTLETETDFS RDARALGERS LKQAEEALKG KGKSSGDEKL YRGINGYTDY KAGFRREQRV  120
ASEKAGGAHG PLRASAHIRV SARFDYQPDI CKDSKETGYC GYGDSCKFMH DRGDYKSGWQ  180
MEKEWDEAEK VRKRNLALGL DDEDDGGVDP GEEDDDDDSL PFACFICRQP FVDAVVTKCK  240
HYFCKHCALK RRKAWSSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-121C3H family protein