PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023927442.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 247aa    MW: 27333.9 Da    PI: 8.7499
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023927442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.28e-3356113259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     + vrYkeClkNhAa++Gg+a+DGCgEfmps+g+egt++alkC+AC+CHRnFHR+e e+
  XP_023927442.1  56 KVVRYKECLKNHAATIGGNATDGCGEFMPSTGDEGTIEALKCSACNCHRNFHRKEIES 113
                     679****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MNSSIQKGEM PFPRSCIHAG GNGHVVPYSE SQPSKSNSAS PPCPSPTLAD HRPHKKVVRY  60
KECLKNHAAT IGGNATDGCG EFMPSTGDEG TIEALKCSAC NCHRNFHRKE IESHCSSQCY  120
HTPLILNNAI LGSPIGYPAN SLIVSYKSGS VPSESDEKDD DDDDDGCGVV ARPAEKVRKR  180
FRTKFTIEQK EKMLSFAEKT GWKMQKLEES TVQQFCQESG IKRRVLKVWM HNNKHKFALK  240
KKTPPAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.13e-62ZF-HD family protein