PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023927717.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 566aa MW: 61668.6 Da PI: 6.7276

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023927717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.5e-09	378	425	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_023927717.1 378 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 425 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MEKENMTQPN WASSTFGMEI QPNELNYAPD QLTNCFFNPN WDNSVDQSDP FESALSSIVS 60 SPAASNAGAI PGGGGDGLMI RELIGRLGSI CNSGDISPQN YIAGHNNNNN STNTSCYSTP 120 LNSPPKLNLS MMDSQIRGNL PIPGNHPSLA PFSPDPGFAE RAARLSCFVS NTSFMGLNEN 180 EFPYRLMPRV ESGKLSRAAS NQSLKLATGS QMGVQKNNRS SPKEANLAAD KKLSRLSRSS 240 TPENAELGDS REGSSVSEQI PGGEVSNKVD TETNGRKRKS IPRGKAKETL SLTTPSAKDS 300 KEFESMEWQA ALDNDESNAK RSKQDENAGN EKDTAKGKAE PKTAGDVNQK QNKDNSKPPE 360 APKDYIHVRA RRGQATDSHS LAERVRREKI SERMKFLQDL VPGCNKVTGK AVMLDEIINY 420 VQSLQRQVEF LSMKLSTVNP RMDLNMDALL SKDIFQSRGA LPHTLYPIDS AMPAFPFGYQ 480 HQQVPSLHSG IANGTENQFP VNSLNAALRR SPSAQLSPID GFGEATPDVS ALWEDDLQSV 540 VQMAFGQNKQ QSFHGSRAAA QMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MEKENMTQPN WASSTFGMEI QPNELNYAPD QLTNCFFNPN WDNSVDQSDP FESALSSIVS  60
SPAASNAGAI PGGGGDGLMI RELIGRLGSI CNSGDISPQN YIAGHNNNNN STNTSCYSTP  120
LNSPPKLNLS MMDSQIRGNL PIPGNHPSLA PFSPDPGFAE RAARLSCFVS NTSFMGLNEN  180
EFPYRLMPRV ESGKLSRAAS NQSLKLATGS QMGVQKNNRS SPKEANLAAD KKLSRLSRSS  240
TPENAELGDS REGSSVSEQI PGGEVSNKVD TETNGRKRKS IPRGKAKETL SLTTPSAKDS  300
KEFESMEWQA ALDNDESNAK RSKQDENAGN EKDTAKGKAE PKTAGDVNQK QNKDNSKPPE  360
APKDYIHVRA RRGQATDSHS LAERVRREKI SERMKFLQDL VPGCNKVTGK AVMLDEIINY  420
VQSLQRQVEF LSMKLSTVNP RMDLNMDALL SKDIFQSRGA LPHTLYPIDS AMPAFPFGYQ  480
HQQVPSLHSG IANGTENQFP VNSLNAALRR SPSAQLSPID GFGEATPDVS ALWEDDLQSV  540
VQMAFGQNKQ QSFHGSRAAA QMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	3e-85	bHLH family protein