PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023928015.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 231aa MW: 25987.4 Da PI: 4.9557

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023928015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.5	0.00056	36	83	1	52
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 +r + erE+ R+++N+ f L + l ++ Ka++L +A++ ++ XP_023928015.1 36 KRIQKAEREKLKREHLNDLFLDLASALELT----QQNSGKASVLCEATRLLR 83 688899*********************996....344455666666666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MSSEAQSPLV DNVNVVTEDS IDRDCPGKKN KGKVPKRIQK AEREKLKREH LNDLFLDLAS 60 ALELTQQNSG KASVLCEATR LLRDLLSQIE CLKKEHTSLL SESKYVTVEK NELREENSAL 120 EIEIEKLQSE LEERIAQSKP DLNVPPPEFQ QPELTSHFPG DCVRLPAVEP SSQQVPAVFV 180 LPICPEALPD VTQQTFKPNS NLSKPHARYP TPMDSWPSQL LGEQPTARKE F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	3e-66	bHLH family protein