PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023928352.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ARR-B
Protein Properties Length: 687aa    MW: 73819.1 Da    PI: 6.8696
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023928352.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.75.2e-28246299155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv+av+qL G +kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  XP_023928352.1 246 KPRVVWSVELHQQFVSAVNQL-GLDKAVPKRILELMNVPGLTRENVASHLQKFRL 299
                     79*******************.********************************8 PP
2Myb_DNA-binding40.46.6e-13248298148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++qk++
   XP_023928352.1 248 RVVWSVELHQQFVSAVNQLGLDkaVPKRILELMNvPGLTRENVASHLQKFR 298
                      678**********************************************97 PP
3Response_reg79.51.1e-26621701109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+ + +++l+q+l++ +y +v+++++++ al+ll+e++  +D++l D+ mp+mdG++ll+     e++lp+i+++a g  + + + ++ G
  XP_023928352.1  62 VLVVDDDVTCLRILEQMLRRCRY-QVTTCSQATVALNLLRERKgcFDVVLSDVHMPDMDGFKLLELVGL-EMDLPVIMMSADGRTSAVMRGIRHG 154
                     89*********************.****************************************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_023928352.1 155 ACDYLIKPIREEELKN 170
                     *************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    
MAAMQRVVAA AQSSASTSGG GGGGGGATSY ASSKGVAASG ASGTAATELV VISDQFPVGL  60
RVLVVDDDVT CLRILEQMLR RCRYQVTTCS QATVALNLLR ERKGCFDVVL SDVHMPDMDG  120
FKLLELVGLE MDLPVIMMSA DGRTSAVMRG IRHGACDYLI KPIREEELKN IWQHVVRKKW  180
NENKEVEHSG SVEENDRHKR GNDDSEYASS ANEGTDGILK AQKKRSNVKD EDDGELENDD  240
PSTSKKPRVV WSVELHQQFV SAVNQLGLDK AVPKRILELM NVPGLTRENV ASHLQKFRLY  300
LKRLSGVAQQ QSGVSNTMCG PVDPNVKLGS LGRFDIQALA ASGQIPPQTL AALHAELLGR  360
PTANLIPGMD QPTLLQASVQ GPKRIPIEHG VAFGQPLVKC PSNVSKHFPQ SVISSVEDVS  420
SGFGVWPSNN LNTVVPSSNL SGLSTQNSNM LMDILQQQQR QQQQSQQQSM PPEPSRTINV  480
QPSCLVVPSQ SASFQAGNSP ASVSQNCSFN RNSVIDYSLL SSQSNNSLVN IGHFSNGDLK  540
TTGALSGYSG PGSISPSVSS CSGNADTSMG RRVQSSTITF GNARQPGFVH NMHDIQGSYG  600
SKTGEVLDQG PLQNLGFVGK GTCIPSRFAV DEFESPMSNM SHGKLFMENN GIRVKQEPSV  660
GFMDNTKVGI PVLQQFSSND IMSVFTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-118ARR-B family protein