PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023928807.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 343aa    MW: 38660.3 Da    PI: 8.6971
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023928807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-12165212355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + h ++Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  XP_023928807.1 165 QDHIIAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 212
                     6799************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEISSIRGLS ELSVEDPRLI NQWQMNSLDE LGILPIAATF GENLQRSFAH PNFNYKNAME  60
TSISEIDRPM KQPKANSWSS PSKLDNVSTL QVASSPNILS FANANYMNQM NILRPKEEAA  120
CPQSMDTIPT EILTAQGSFG NQNYVYKACQ GAKRLSTSTR LSQTQDHIIA ERKRREKLSQ  180
RFIALSAIVP GLKKMDKASV LGDAIKYLKQ LQERVKTLEE QTKKKNRESV VFVKKSQLFT  240
DGDNSTSDKN SSSDPLDEPL PEIEARFCDK NVLVRIHCEK RKGLLEKSVT EIEKLHLTVI  300
NSSVMTFGSS ALDITIIAQM DEEFCMTVKD LVRNLRSAFK LFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176ERKRRE
2172177RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-68bHLH family protein