PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023928980.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 609aa MW: 66837.2 Da PI: 9.1045

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023928980.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	122.2	2.7e-38	108	211	1	103
HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX..XXXXXXXX CS HSF_DNA-bind 1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks..Fkkgkkel 93 aF++kly++led+++++lisws++++sfv+++++ef+k vL++yFkh+n++SFvRQLnmYgF+kv+d ++ + ++++weFkh Fk+g+ XP_023928980.1 108 AFIHKLYNMLEDSSIQHLISWSATNESFVMSPSSEFSK-VLAQYFKHTNISSFVRQLNMYGFHKVSDVFQTGSPDSPLWEFKHGAgnFKRGDLVG 201 6*******************999*********.***************************99999****9888**** PP XXXXXXXXXX CS HSF_DNA-bind 94 lekikrkkse 103 l++ikr++s+ XP_023928980.1 202 LREIKRRASR 211 *****875 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MATLAESPRR SPFPIDPRGY STSPSKTLPI LSTAVTLPSI TAIDQMDISQ PQSGAMGPPS 60 QHSPKADGDR MSDQHTPTPN EHHHVNGSHA HPVGAAAAAQ HPKVVQTAFI HKLYNMLEDS 120 SIQHLISWSA TNESFVMSPS SEFSKVLAQY FKHTNISSFV RQLNMYGFHK VSDVFQTGSP 180 DSPLWEFKHG AGNFKRGDLV GLREIKRRAS RHTLIHRDSF STAAPKVPLP PPPGPPMESL 240 QDPVENRLNL LEWNTHDLYS RLSRTEEAYT AMANKCQALL DGLSRCHMWN EQLSSHLLTL 300 VPDPENSVHR DVYAMRQEIS GRMENLRSLG ESYDSSFGSK HSFAQNGGIF QSETGLPMSP 360 RQRPFDDSRR PSLQGVHTLG RSNTIRAAVP PHLQTSPRRY GSMSGSGPYS PATSRPTAAP 420 PPPPVSQPPQ QPPQPPHPLS NMSSPPGLPR RHTSADIRVQ GWQGGQPPPN YPPGSSPYAS 480 GQSSTVWPSS PRTQTHAGDQ QIQDALAQYE LPRVTHNGSQ QPPSPGPHDT GIPTFSHNFN 540 SSYANSNDTG WQLPGPRYPF KGLETPGPPT RRSSMASNVH SLLNPADTAE RENEDEGAAP 600 DERKRKRMQ

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MATLAESPRR SPFPIDPRGY STSPSKTLPI LSTAVTLPSI TAIDQMDISQ PQSGAMGPPS  60
QHSPKADGDR MSDQHTPTPN EHHHVNGSHA HPVGAAAAAQ HPKVVQTAFI HKLYNMLEDS  120
SIQHLISWSA TNESFVMSPS SEFSKVLAQY FKHTNISSFV RQLNMYGFHK VSDVFQTGSP  180
DSPLWEFKHG AGNFKRGDLV GLREIKRRAS RHTLIHRDSF STAAPKVPLP PPPGPPMESL  240
QDPVENRLNL LEWNTHDLYS RLSRTEEAYT AMANKCQALL DGLSRCHMWN EQLSSHLLTL  300
VPDPENSVHR DVYAMRQEIS GRMENLRSLG ESYDSSFGSK HSFAQNGGIF QSETGLPMSP  360
RQRPFDDSRR PSLQGVHTLG RSNTIRAAVP PHLQTSPRRY GSMSGSGPYS PATSRPTAAP  420
PPPPVSQPPQ QPPQPPHPLS NMSSPPGLPR RHTSADIRVQ GWQGGQPPPN YPPGSSPYAS  480
GQSSTVWPSS PRTQTHAGDQ QIQDALAQYE LPRVTHNGSQ QPPSPGPHDT GIPTFSHNFN  540
SSYANSNDTG WQLPGPRYPF KGLETPGPPT RRSSMASNVH SLLNPADTAE RENEDEGAAP  600
DERKRKRMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	4e-20	HSF family protein