PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929266.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 176aa    MW: 20446.5 Da    PI: 9.9304
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929266.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-2134122189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +f+ ++++++GF+ rk++ +k+k++++it++ fvC k+g r +ek++   + r+   trt+C  kl v++ +  gk++v+++ +eHnH+l
  XP_023929266.1  34 EFWLKFGRQMGFDARKHYINKNKNDEKITSNGFVCAKQGIRGPEKEN-MIRTRNLDDTRTNCPVKLYVSLVReIGKFKVIDFIEEHNHTL 122
                     69*******************************************99.9999999***************9989**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MDSNEDLSPR VMDANEDLSP RVGMEFDTLK DAWEFWLKFG RQMGFDARKH YINKNKNDEK  60
ITSNGFVCAK QGIRGPEKEN MIRTRNLDDT RTNCPVKLYV SLVREIGKFK VIDFIEEHNH  120
TLHLSETIYM MRSQRKISKV HARLIELASS SRIKPKATHK LMSREACGRT NLGFVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-17FAR1 family protein