PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929334.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family SBP
Protein Properties Length: 208aa    MW: 23436.6 Da    PI: 9.5431
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP124.25.7e-3984160177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cq+++C +dl+ ak+yh+rhkvCe h+ka+vvlv+g++qrfCqqCs+fhe+s+fD++k+sCr++La+hnerrrk+ 
  XP_023929334.1  84 RCQADECGVDLKMAKTYHKRHKVCERHAKAAVVLVTGIRQRFCQQCSKFHEISQFDDNKKSCREKLAGHNERRRKTY 160
                     6**************************************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAKRPFKKQE QEQECSDPYE DGEEEVEYTR KKVMIRVVSA GQRMSSLVPL MSYSSDSSSS  60
SSSTSTSTCY GNIIGGSDSI GSLRCQADEC GVDLKMAKTY HKRHKVCERH AKAAVVLVTG  120
IRQRFCQQCS KFHEISQFDD NKKSCREKLA GHNERRRKTY ADLQAENKQK PPTSIMGGGL  180
LKAMRYSNYG EKSLPGSPNM KHCRINFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.11e-33SBP family protein