PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929448.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 309aa    MW: 34044.1 Da    PI: 6.5177
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.10.000361912291255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_023929448.1 191 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 229
                     6678889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MMAGNPNWWS MPPPSLLPPQ YALGSSSLPF NPLAAENQEL PQSWSQLLLG GLSASDEESF  60
RLSHFQPKKL ENWDDQILNQ SQRVLPVNVD VIKQEISQNS NLYGLEDHEE FQALPRQAAW  120
SQQIMPVSSP RSCVTSLSNN NILDFSYKKM DGSNQNLDHS SESTSSATGG AYKKARVQPS  180
STSSQPPLKV RKEKLGDRIT SLHQLVSPFG KTDTASVLLE AIGYIRFLQG QIEALSSPYF  240
GNASKNMRSQ QSLLNDACLK RKEAPNQDTQ DKPRDLKSRG LCLVPVSCTQ LVGNDNGADF  300
WAPAYGGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.14e-56bHLH family protein