PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929510.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HSF
Protein Properties Length: 331aa    MW: 37000 Da    PI: 5.8103
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1132e-35101022103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k+y++++d+ +++li+w + +nsf+v+d+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+k+ll +
  XP_023929510.1  10 FIMKTYQMVNDPMTDSLITWGRANNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEWFLRGQKHLLVN 95 
                     9********************999*****************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i rkk++
  XP_023929510.1  96 IVRKKHN 102
                     ***9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MEGCNVIAPF IMKTYQMVND PMTDSLITWG RANNSFIVVD PLDFSQRILP AYFKHNNFSS  60
FVRQLNTYGF RKVDPDKWEF ANEWFLRGQK HLLVNIVRKK HNRSSYSQGK NEELVEDEDL  120
VMEIARLKKE QKAMEDELEG MKKRLEATEK RPKQMMAFLH KVAENPDILP NLMFQRERTR  180
QLISEKKRRL MISSTSSSSS GAVAATTTTI TSSIKTEDED EGTIGVVISS SPNTGFKIEN  240
FCEQSSPSPE TQTPAWLIQS EVMGRSQIGQ EPFGCSAMNG IGSNMAVSPL ESGVLGYGNS  300
GGQISYFAEM AAGMEVSPPT PYPFSLLGGG F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.14e-88HSF family protein