PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023929565.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 746aa MW: 85648.7 Da PI: 8.5713

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023929565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.6	6.8e-26	30	117	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 fYneY+k++GFs+rk++ +k k++g +t+r+fvC keg r ++k++ ++ +++raetr+gC+a+l++ +++ ++k++v+++ eHnH l XP_023929565.1 30 FYNEYGKKAGFSTRKEYINKCKKTGVVTSRRFVCAKEGVRGKDKRD-QNVKNPRAETRCGCEARLVIVLNRdSKKYVVSEFIAEHNHYL 117 9****************************************999.999**************99989************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence
MGIHVPSNVP MESTPFKGME FEADEIAYGF YNEYGKKAGF STRKEYINKC KKTGVVTSRR 60 FVCAKEGVRG KDKRDQNVKN PRAETRCGCE ARLVIVLNRD SKKYVVSEFI AEHNHYLHLP 120 STVHMMPSQR KVAATHAIEF DLAHESGLRL KQSFYEFLSK QVGGYDTLGF TKQDHKNYLR 180 TKRQRDMEHG ATASLGRYFS HQPKKNPSYY FPTQLDCEEL ITNIFWADAR IIIDYSHFGD 240 VITFDTTYST NRDARPLGVF LGLNHHRETV VFGGALLYDE TIESFVWLFE TFLEAMSEKK 300 PITIFTDQDA AMSAAIKVVM PETYHALCSW HMWQNAEKHL GHLLKNEPQF NTDFLACIYE 360 YDSEDEFLTA WNEMLDKYDV RENKWLIDLF KLKEKWAQAY VKRTFTAGMK TTQLSESFNA 420 DLKDCLRTDF NIVEFFTHFE TVVNQKRDKE LEAEYNCRQK FPRLKLKSSP MLNQVATVYT 480 PKLFDLFQTE VEEVMALSIL ERNVSQTHSY VVGVFNQNGK FEVMWNPLDE TLSCSCRKFE 540 SFGILCRHGL KVLDALDIKL IPNRYIMKRN CKANVEEDII RPSTDFADKE DQLCASITIV 600 PKGIKKREVY RNKKRRTKSW IEKMRKPKEG TSKKQTKKRK VQEEIYARDI MAQKKTEDIS 660 SGNTASLTQL LMSAFTSSAV HQEGSSASVA LTSHLESTSS VVGSNDKING VGGIMTQGSV 720 ASGGPLTQES ITSGWNPMVH KVKPFF

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence

MGIHVPSNVP MESTPFKGME FEADEIAYGF YNEYGKKAGF STRKEYINKC KKTGVVTSRR  60
FVCAKEGVRG KDKRDQNVKN PRAETRCGCE ARLVIVLNRD SKKYVVSEFI AEHNHYLHLP  120
STVHMMPSQR KVAATHAIEF DLAHESGLRL KQSFYEFLSK QVGGYDTLGF TKQDHKNYLR  180
TKRQRDMEHG ATASLGRYFS HQPKKNPSYY FPTQLDCEEL ITNIFWADAR IIIDYSHFGD  240
VITFDTTYST NRDARPLGVF LGLNHHRETV VFGGALLYDE TIESFVWLFE TFLEAMSEKK  300
PITIFTDQDA AMSAAIKVVM PETYHALCSW HMWQNAEKHL GHLLKNEPQF NTDFLACIYE  360
YDSEDEFLTA WNEMLDKYDV RENKWLIDLF KLKEKWAQAY VKRTFTAGMK TTQLSESFNA  420
DLKDCLRTDF NIVEFFTHFE TVVNQKRDKE LEAEYNCRQK FPRLKLKSSP MLNQVATVYT  480
PKLFDLFQTE VEEVMALSIL ERNVSQTHSY VVGVFNQNGK FEVMWNPLDE TLSCSCRKFE  540
SFGILCRHGL KVLDALDIKL IPNRYIMKRN CKANVEEDII RPSTDFADKE DQLCASITIV  600
PKGIKKREVY RNKKRRTKSW IEKMRKPKEG TSKKQTKKRK VQEEIYARDI MAQKKTEDIS  660
SGNTASLTQL LMSAFTSSAV HQEGSSASVA LTSHLESTSS VVGSNDKING VGGIMTQGSV  720
ASGGPLTQES ITSGWNPMVH KVKPFF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	613	618	KKRRTK
2	613	638	KKRRTKSWIEKMRKPKEGTSKKQTKK
3	613	640	KKRRTKSWIEKMRKPKEGTSKKQTKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-124	FAR1 family protein