PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929612.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 259aa    MW: 28346.5 Da    PI: 5.3023
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034106128123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023929612.1 106 FSCNYCQRKFFSSQALGGHQNAH 128
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MKPNFDLEIK APSESDSEVS SQVASNISIQ ETSAGPSNDS LTNCSHLTNL IVAQSESEPV  60
TLDLTLSFNT DDLCGRDSFG LSLSSTSESS NEPVSHTTTA AIPRVFSCNY CQRKFFSSQA  120
LGGHQNAHKR ERTLAKRAMR MGIFSERYAS LASLPLHGSS FRSLGIKAHS SVHYGFVPPV  180
RPSEVRNNTR FQNGYMGMPI FVEDDETELL WPGSFRQVAE AGNPPHPSFV LTESSNINFV  240
EVTPQVDIDN STPDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.11e-38C2H2 family protein