PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929631.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 178aa    MW: 20116.2 Da    PI: 8.7183
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929631.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-091464554
                    HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                     +++E++RR +++s   +L +l+P   s+a+    s  + L  Av YI +L
  XP_023929631.1 14 RKMVEKNRRMQMKSLCLKLSSLIPAnHSRATRDIISQQDQLDFAVTYITQL 64
                    579**********************888999999***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MKTSSSSEKS KLDRKMVEKN RRMQMKSLCL KLSSLIPANH SRATRDIISQ QDQLDFAVTY  60
ITQLKENIEK LKIRKEQAME LENGSNTMDT TMFGSRLPVF DLKDLGSSIE VIVISGLQKS  120
FMVYEIISIL EEEGAEVVSA SFSTVGDKVF HTVHAQVKIS RVGVETTRVC QRLQELIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-30bHLH family protein