PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929659.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 256aa    MW: 27768.7 Da    PI: 9.0101
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.2e-202272256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++ a+++++g+
  XP_023929659.1 22 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDTAAREFRGA 72
                    69*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAPRERAVKG NGNGNGIGKE VHFRGVRKRP WGRYAAEIRD PGKKSRVWLG TFDTAEEAAR  60
AYDTAAREFR GAKAKTNFPF PIENANDVNN INKMDNNNNN NNNVNCHSNN QSPSQSSTVE  120
SPTRDPSALL VESSPLDLNI AQGHAYGGAA AGFGSVPMRF PFQQHHRPGF FAGGLPAAAA  180
NQVIYFDTMV RAGMLASHPY NQLNFDHFQP AATVSGGVQS DSDSSSVVDL NHRDQKLQKL  240
GILGLDLNQP PPPEFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-27ERF family protein