PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929768.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 235aa    MW: 26372.7 Da    PI: 7.0446
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.44.1e-161564255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  XP_023929768.1 15 RSKHSVTEQRRRSKINERFQILRDLIPNS----DQKRDTASFLLEVIEYVQYLQ 64
                    899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MKPDAKNNDK ASAIRSKHSV TEQRRRSKIN ERFQILRDLI PNSDQKRDTA SFLLEVIEYV  60
QYLQERVHKY EGSYQGWSSE PTKLMPWRNS HWRVQNFVGH PQTIKNGSGL GTTFPGKFDE  120
NNVSITPTML TSTQNPVESD PSRDITCKPM DRQPELANKG LPLPIPLQAN VPISVRGDGV  180
QAHPLQGLVS DAQSTQSPMT SETLNQQEEL IIEGGTISIS SVYSQGWVII EICCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.19e-93bHLH family protein