PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023929775.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 196aa MW: 21979.4 Da PI: 8.7477

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023929775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.00098	87	107	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk+F k +L H+++H XP_023929775.1 87 CIVCGKHFCKKKSLGGHMKRH 107 558*****************9 PP
2	zf-C2H2	15	7.4e-05	128	148	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk+F +k L H++ H XP_023929775.1 128 CVVCGKRFVSKKALGGHMKQH 148 99*****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MTQVLFRSNN LLLINKLSNV KEEVYGALDS FIAWDLEFPL ITVKKALKTL EDQREWKRII 60 QFYSSFILSM DNDGTVLSLS LPEIWECIVC GKHFCKKKSL GGHMKRHPER PWRGLYPPPT 120 GHHAPEACVV CGKRFVSKKA LGGHMKQHPE RSWRGLLPPT GEPAAASNGN TTASSVIDLN 180 QPAPLLIDLN QPAPEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56200.1	9e-11	C2H2 family protein